IL_4V5G_388
3D structure
- PDB id
- 4V5G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GCCAGCUAAG*CGAAGCUGC
- Length
- 19 nucleotides
- Bulged bases
- 4V5G|1|DA|C|994, 4V5G|1|DA|C|995, 4V5G|1|DA|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5G|1|DA|G|993
4V5G|1|DA|C|994
4V5G|1|DA|C|995
4V5G|1|DA|A|996
4V5G|1|DA|G|997
4V5G|1|DA|C|998
4V5G|1|DA|U|999
4V5G|1|DA|A|1000
4V5G|1|DA|A|1001
4V5G|1|DA|G|1002
*
4V5G|1|DA|C|1153
4V5G|1|DA|G|1154
4V5G|1|DA|A|1155
4V5G|1|DA|A|1156
4V5G|1|DA|G|1157
4V5G|1|DA|C|1158
4V5G|1|DA|U|1159
4V5G|1|DA|G|1160
4V5G|1|DA|C|1161
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain D3
- 50S RIBOSOMAL PROTEIN L30
- Chain DB
- 5S ribosomal RNA; 5S rRNA
- Chain DN
- 50S RIBOSOMAL PROTEIN L13
- Chain DU
- 50S RIBOSOMAL PROTEIN L20
- Chain DV
- 50S RIBOSOMAL PROTEIN L21
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