3D structure

PDB id
4V5G (explore in PDB, NAKB, or RNA 3D Hub)
Description
The crystal structure of the 70S ribosome bound to EF-Tu and tRNA
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
CCCAAAGGUCCCCUC*GAGCG
Length
20 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V5G|1|DA|C|2283
4V5G|1|DA|C|2284
4V5G|1|DA|C|2285
4V5G|1|DA|A|2286
4V5G|1|DA|A|2287
4V5G|1|DA|A|2288
4V5G|1|DA|G|2289
4V5G|1|DA|G|2290
4V5G|1|DA|U|2291
4V5G|1|DA|C|2292
4V5G|1|DA|C|2293
4V5G|1|DA|C|2294
4V5G|1|DA|C|2295
4V5G|1|DA|U|2296
4V5G|1|DA|C|2297
*
4V5G|1|DA|G|2321
4V5G|1|DA|A|2322
4V5G|1|DA|G|2323
4V5G|1|DA|C|2324
4V5G|1|DA|G|2325

Current chains

Chain DA
23S RIBOSOMAL RNA

Nearby chains

Chain CV
Transfer RNA; tRNA
Chain D6
50S RIBOSOMAL PROTEIN L33
Chain D8
50S RIBOSOMAL PROTEIN L35
Chain DB
5S ribosomal RNA; 5S rRNA
Chain DG
50S RIBOSOMAL PROTEIN L5
Chain DS
50S RIBOSOMAL PROTEIN L18

Coloring options:

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