IL_4V5G_433

3D structure

PDB id

4V5G (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the 70S ribosome bound to EF-Tu and tRNA

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5G_433 not in the Motif Atlas

Homologous match to IL_4LFB_012

Geometric discrepancy: 0.2189

The information below is about IL_4LFB_012

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47074.2

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

4V5G|1|CA|U|249
4V5G|1|CA|A|250
4V5G|1|CA|G|251
4V5G|1|CA|U|252
*
4V5G|1|CA|A|274
4V5G|1|CA|G|275

Current chains

Chain CA

16S RIBOSOMAL RNA

Nearby chains

Chain CQ

30S RIBOSOMAL PROTEIN S17