IL_4V5J_340
3D structure
- PDB id
- 4V5J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide release
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CCC*GGAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5J_340 not in the Motif Atlas
- Homologous match to IL_4WF9_114
- Geometric discrepancy: 0.1319
- The information below is about IL_4WF9_114
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_10810.1
- Basepair signature
- cWW-L-cWS-cSH-cWW
- Number of instances in this motif group
- 1
Unit IDs
4V5J|1|DB|C|30
4V5J|1|DB|C|31
4V5J|1|DB|C|32
*
4V5J|1|DB|G|50
4V5J|1|DB|G|51
4V5J|1|DB|A|52
4V5J|1|DB|A|53
4V5J|1|DB|G|54
Current chains
- Chain DB
- 5S RIBOSOMAL RNA
Nearby chains
- Chain DG
- 50S RIBOSOMAL PROTEIN L5
- Chain DS
- 50S RIBOSOMAL PROTEIN L18
Coloring options: