IL_4V5K_213

3D structure

PDB id

4V5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CGAAGUCG*CGCCGAG

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5K|1|CA|C|1431
4V5K|1|CA|G|1432
4V5K|1|CA|A|1433
4V5K|1|CA|A|1434
4V5K|1|CA|G|1435
4V5K|1|CA|U|1436
4V5K|1|CA|C|1437
4V5K|1|CA|G|1438
*
4V5K|1|CA|C|1463
4V5K|1|CA|G|1464
4V5K|1|CA|C|1465
4V5K|1|CA|C|1466
4V5K|1|CA|G|1467
4V5K|1|CA|A|1468
4V5K|1|CA|G|1469

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CT

30S RIBOSOMAL PROTEIN S20

Chain DA

Large subunit ribosomal RNA; LSU rRNA

Chain DT

50S RIBOSOMAL PROTEIN L19