IL_4V5K_294

3D structure

PDB id

4V5K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UGGUC*GCUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5K|1|DA|U|2099
4V5K|1|DA|G|2100
4V5K|1|DA|G|2101
4V5K|1|DA|U|2102
4V5K|1|DA|C|2103
*
4V5K|1|DA|G|2187
4V5K|1|DA|C|2188
4V5K|1|DA|U|2189
4V5K|1|DA|G|2190

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DI

50S RIBOSOMAL PROTEIN L9