IL_4V5K_350
3D structure
- PDB id
- 4V5K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of cytotoxic domain of colicin E3 bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUAGA*UCCGAAG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5K|1|DA|U|858
4V5K|1|DA|G|859
4V5K|1|DA|U|860
4V5K|1|DA|A|861
4V5K|1|DA|G|862
4V5K|1|DA|A|863
*
4V5K|1|DA|U|913
4V5K|1|DA|C|914
4V5K|1|DA|C|915
4V5K|1|DA|G|916
4V5K|1|DA|A|917
4V5K|1|DA|A|918
4V5K|1|DA|G|919
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain D0
- 50S RIBOSOMAL PROTEIN L27
- Chain D3
- 50S RIBOSOMAL PROTEIN L30
- Chain DB
- 5S ribosomal RNA; 5S rRNA
- Chain DQ
- 50S RIBOSOMAL PROTEIN L16
- Chain DZ
- 50S RIBOSOMAL PROTEIN L25
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