Loop IL_4V5L

3D structure

PDB id: 4V5L (explore in PDB, NAKB, or RNA 3D Hub)
Description: The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analog
Experimental method: X-RAY DIFFRACTION
Resolution: 3.1 Å

Loop

Sequence: CGCGCCUGCGUAGGAUAGGUGGGAGC*GCGCCGGUGAAAUACCACCCUGGCGCG
Length: 53 nucleotides
Bulged bases: 4V5L|1|BA|A|2126, 4V5L|1|BA|A|2173, 4V5L|1|BA|C|2179
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

4V5L|1|BA|C|2103
4V5L|1|BA|G|2104
4V5L|1|BA|C|2105
4V5L|1|BA|G|2106
4V5L|1|BA|C|2107
4V5L|1|BA|C|2108
4V5L|1|BA|U|2109
4V5L|1|BA|G|2110
4V5L|1|BA|C|2111
4V5L|1|BA|G|2112
4V5L|1|BA|U|2113
4V5L|1|BA|A|2114
4V5L|1|BA|G|2115
4V5L|1|BA|G|2116
4V5L|1|BA|A|2117
4V5L|1|BA|U|2118
4V5L|1|BA|A|2119
4V5L|1|BA|G|2120
4V5L|1|BA|G|2121
4V5L|1|BA|U|2122
4V5L|1|BA|G|2123
4V5L|1|BA|G|2124
4V5L|1|BA|G|2125
4V5L|1|BA|A|2126
4V5L|1|BA|G|2127
4V5L|1|BA|C|2128
*
4V5L|1|BA|G|2160
4V5L|1|BA|C|2161
4V5L|1|BA|G|2162
4V5L|1|BA|C|2163
4V5L|1|BA|C|2164
4V5L|1|BA|G|2165
4V5L|1|BA|G|2166
4V5L|1|BA|U|2167
4V5L|1|BA|G|2168
4V5L|1|BA|A|2169
4V5L|1|BA|A|2170
4V5L|1|BA|A|2171
4V5L|1|BA|U|2172
4V5L|1|BA|A|2173
4V5L|1|BA|C|2174
4V5L|1|BA|C|2175
4V5L|1|BA|A|2176
4V5L|1|BA|C|2177
4V5L|1|BA|C|2178
4V5L|1|BA|C|2179
4V5L|1|BA|U|2180
4V5L|1|BA|G|2181
4V5L|1|BA|G|2182
4V5L|1|BA|C|2183
4V5L|1|BA|G|2184
4V5L|1|BA|C|2185
4V5L|1|BA|G|2186

Current chains

Chain BA: 23S RIBOSOMAL RNA

Nearby chains

Chain AK: 30S RIBOSOMAL PROTEIN S11
Chain AW: Transfer RNA; tRNA
Chain BC: 50S RIBOSOMAL PROTEIN L1

IL_4V5L_185