IL_4V5N_023
3D structure
- PDB id
- 4V5N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- tRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 7.6 Å
Loop
- Sequence
- GUGUAG*UGAGGC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5N_023 not in the Motif Atlas
- Geometric match to IL_3LQX_002
- Geometric discrepancy: 0.2559
- The information below is about IL_3LQX_002
- Detailed Annotation
- tSH-tHW-tHS-cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_76308.6
- Basepair signature
- cWW-tSH-tHW-tHS-cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
4V5N|1|AA|G|579
4V5N|1|AA|U|580
4V5N|1|AA|G|581
4V5N|1|AA|U|582
4V5N|1|AA|A|583
4V5N|1|AA|G|584
*
4V5N|1|AA|U|757
4V5N|1|AA|G|758
4V5N|1|AA|A|759
4V5N|1|AA|G|760
4V5N|1|AA|G|761
4V5N|1|AA|C|762
Current chains
- Chain AA
- 16S RRNA
Nearby chains
- Chain AH
- 30S RIBOSOMAL PROTEIN S8
- Chain AL
- 30S RIBOSOMAL PROTEIN S12
- Chain AO
- 30S RIBOSOMAL PROTEIN S15
- Chain AQ
- 30S RIBOSOMAL PROTEIN S17
- Chain BA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: