IL_4V5N_119

3D structure

PDB id

4V5N (explore in PDB, NAKB, or RNA 3D Hub)

Description

tRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)

Experimental method

ELECTRON MICROSCOPY

Resolution

7.6 Å

Loop

Sequence

GAGAAC*GAC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5N_119 not in the Motif Atlas

Homologous match to IL_4WF9_062

Geometric discrepancy: 0.108

The information below is about IL_4WF9_062

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.4

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

5

Unit IDs

4V5N|1|BA|G|1651
4V5N|1|BA|A|1652
4V5N|1|BA|G|1653
4V5N|1|BA|A|1654
4V5N|1|BA|A|1655
4V5N|1|BA|C|1656
*
4V5N|1|BA|G|2004
4V5N|1|BA|A|2005
4V5N|1|BA|C|2006

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain BE

50S RIBOSOMAL PROTEIN L3

Chain BR

50S RIBOSOMAL PROTEIN L17