IL_4V5P_141

3D structure

PDB id

4V5P (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGCCUGCGUAGGAUAG*CCCUGGCG

Length

24 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5P|1|BA|C|2105
4V5P|1|BA|G|2106
4V5P|1|BA|C|2107
4V5P|1|BA|C|2108
4V5P|1|BA|U|2109
4V5P|1|BA|G|2110
4V5P|1|BA|C|2111
4V5P|1|BA|G|2112
4V5P|1|BA|U|2113
4V5P|1|BA|A|2114
4V5P|1|BA|G|2115
4V5P|1|BA|G|2116
4V5P|1|BA|A|2117
4V5P|1|BA|U|2118
4V5P|1|BA|A|2119
4V5P|1|BA|G|2120
*
4V5P|1|BA|C|2177
4V5P|1|BA|C|2178
4V5P|1|BA|C|2179
4V5P|1|BA|U|2180
4V5P|1|BA|G|2181
4V5P|1|BA|G|2182
4V5P|1|BA|C|2183
4V5P|1|BA|G|2184

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain AK

30S RIBOSOMAL PROTEIN S11

Chain AW

Transfer RNA; tRNA

Chain BC

50S RIBOSOMAL PROTEIN L1