IL_4V5P_312

3D structure

PDB id

4V5P (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UUGGUCGC*GCGGCUGG

Length

16 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5P|1|DA|U|2098
4V5P|1|DA|U|2099
4V5P|1|DA|G|2100
4V5P|1|DA|G|2101
4V5P|1|DA|U|2102
4V5P|1|DA|C|2103
4V5P|1|DA|G|2104
4V5P|1|DA|C|2105
*
4V5P|1|DA|G|2184
4V5P|1|DA|C|2185
4V5P|1|DA|G|2186
4V5P|1|DA|G|2187
4V5P|1|DA|C|2188
4V5P|1|DA|U|2189
4V5P|1|DA|G|2190
4V5P|1|DA|G|2191

Current chains

Chain DA

23S RIBOSOMAL RNA

Nearby chains

Chain CK

30S RIBOSOMAL PROTEIN S11

Chain DC

50S RIBOSOMAL PROTEIN L1