IL_4V5P_351

3D structure

PDB id

4V5P (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CC*GAGGGUGAAAG

Length

13 nucleotides

Bulged bases

4V5P|1|BA|G|329, 4V5P|1|BA|A|330, 4V5P|1|BA|A|331

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5P|1|BA|C|318
4V5P|1|BA|C|319
*
4V5P|1|BA|G|323
4V5P|1|BA|A|324
4V5P|1|BA|G|325
4V5P|1|BA|G|326
4V5P|1|BA|G|327
4V5P|1|BA|U|328
4V5P|1|BA|G|329
4V5P|1|BA|A|330
4V5P|1|BA|A|331
4V5P|1|BA|A|332
4V5P|1|BA|G|333

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain BF

50S RIBOSOMAL PROTEIN L4

Chain BY

50S RIBOSOMAL PROTEIN L24