3D structure

PDB id
4V5Q (explore in PDB, NAKB, or RNA 3D Hub)
Description
The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
CC*GAG
Length
5 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V5Q_048 not in the Motif Atlas
Geometric match to IL_4LFB_053
Geometric discrepancy: 0.144
The information below is about IL_4LFB_053
Detailed Annotation
Not an internal loop
Broad Annotation
Not an internal loop
Motif group
IL_58310.1
Basepair signature
cWW-tHS-cWW
Number of instances in this motif group
25

Unit IDs

4V5Q|1|AA|C|1259
4V5Q|1|AA|C|1260
*
4V5Q|1|AA|G|1274
4V5Q|1|AA|A|1275
4V5Q|1|AA|G|1276

Current chains

Chain AA
16S RRNA

Nearby chains

Chain AU
30S RIBOSOMAL PROTEIN THX

Coloring options:


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