IL_4V5Q_072

3D structure

PDB id

4V5Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAG*UGGG

Length

7 nucleotides

Bulged bases

4V5Q|1|BA|G|352

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V5Q_072 not in the Motif Atlas

Geometric match to IL_8VTW_011

Geometric discrepancy: 0.2749

The information below is about IL_8VTW_011

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38958.10

Basepair signature

cWW-cWW-cWW-tHS

Number of instances in this motif group

9

Unit IDs

4V5Q|1|BA|C|288
4V5Q|1|BA|A|289
4V5Q|1|BA|G|290
*
4V5Q|1|BA|U|350
4V5Q|1|BA|G|351
4V5Q|1|BA|G|352
4V5Q|1|BA|G|353

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains