IL_4V5Q_291
3D structure
- PDB id
- 4V5Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGUAAC*GGAGAAG
- Length
- 13 nucleotides
- Bulged bases
- 4V5Q|1|DA|G|1699
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V5Q_291 not in the Motif Atlas
- Homologous match to IL_7RQB_068
- Geometric discrepancy: 0.1216
- The information below is about IL_7RQB_068
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_65969.2
- Basepair signature
- cWW-tSH-tSH-tHH-tHS-cWW
- Number of instances in this motif group
- 8
Unit IDs
4V5Q|1|DA|C|1686
4V5Q|1|DA|G|1687
4V5Q|1|DA|U|1688
4V5Q|1|DA|A|1689
4V5Q|1|DA|A|1690
4V5Q|1|DA|C|1691
*
4V5Q|1|DA|G|1696
4V5Q|1|DA|G|1697
4V5Q|1|DA|A|1698
4V5Q|1|DA|G|1699
4V5Q|1|DA|A|1700
4V5Q|1|DA|A|1701
4V5Q|1|DA|G|1702
Current chains
- Chain DA
- 23S RIBOSOMAL RNA
Nearby chains
- Chain CA
- Small subunit ribosomal RNA; SSU rRNA
- Chain DD
- 50S RIBOSOMAL PROTEIN L2
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