IL_4V5Q_342

3D structure

PDB id

4V5Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGGGAGC*GCAG

Length

11 nucleotides

Bulged bases

4V5Q|1|AA|G|1442, 4V5Q|1|AA|G|1442|||A, 4V5Q|1|AA|A|1442|||B

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5Q|1|AA|C|1440
4V5Q|1|AA|G|1441
4V5Q|1|AA|G|1442
4V5Q|1|AA|G|1442|||A
4V5Q|1|AA|A|1442|||B
4V5Q|1|AA|G|1443
4V5Q|1|AA|C|1444
*
4V5Q|1|AA|G|1458
4V5Q|1|AA|C|1459
4V5Q|1|AA|A|1460
4V5Q|1|AA|G|1461

Current chains

Chain AA

16S RRNA

Nearby chains

Chain AT

30S RIBOSOMAL PROTEIN S20

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BT

50S RIBOSOMAL PROTEIN L19