IL_4V5S_344

3D structure

PDB id

4V5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UUGGUCGCGCCUGCGUAGGAUAG*CCCUGGCGCGGCUGG

Length

38 nucleotides

Bulged bases

4V5S|1|BA|C|2103

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5S|1|BA|U|2098
4V5S|1|BA|U|2099
4V5S|1|BA|G|2100
4V5S|1|BA|G|2101
4V5S|1|BA|U|2102
4V5S|1|BA|C|2103
4V5S|1|BA|G|2104
4V5S|1|BA|C|2105
4V5S|1|BA|G|2106
4V5S|1|BA|C|2107
4V5S|1|BA|C|2108
4V5S|1|BA|U|2109
4V5S|1|BA|G|2110
4V5S|1|BA|C|2111
4V5S|1|BA|G|2112
4V5S|1|BA|U|2113
4V5S|1|BA|A|2114
4V5S|1|BA|G|2115
4V5S|1|BA|G|2116
4V5S|1|BA|A|2117
4V5S|1|BA|U|2118
4V5S|1|BA|A|2119
4V5S|1|BA|G|2120
*
4V5S|1|BA|C|2177
4V5S|1|BA|C|2178
4V5S|1|BA|C|2179
4V5S|1|BA|U|2180
4V5S|1|BA|G|2181
4V5S|1|BA|G|2182
4V5S|1|BA|C|2183
4V5S|1|BA|G|2184
4V5S|1|BA|C|2185
4V5S|1|BA|G|2186
4V5S|1|BA|G|2187
4V5S|1|BA|C|2188
4V5S|1|BA|U|2189
4V5S|1|BA|G|2190
4V5S|1|BA|G|2191

Current chains

Chain BA

23S RIBOSOMAL RNA

Nearby chains

Chain AK

30S RIBOSOMAL PROTEIN S11

Chain AW

Transfer RNA; tRNA

Chain BC

50S RIBOSOMAL PROTEIN L1