IL_4V5S_355
3D structure
- PDB id
- 4V5S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- AUAGCUCAGUCGGUAGAGCAGG*CCGUGUCCUUGGUUCGAUUCCGAGU
- Length
- 47 nucleotides
- Bulged bases
- 4V5S|1|CW|C|17, 4V5S|1|CW|U|47
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V5S|1|CW|A|7
4V5S|1|CW|U|8
4V5S|1|CW|A|9
4V5S|1|CW|G|10
4V5S|1|CW|C|11
4V5S|1|CW|U|12
4V5S|1|CW|C|13
4V5S|1|CW|A|14
4V5S|1|CW|G|15
4V5S|1|CW|U|16
4V5S|1|CW|C|17
4V5S|1|CW|G|18
4V5S|1|CW|G|19
4V5S|1|CW|U|20
4V5S|1|CW|A|21
4V5S|1|CW|G|22
4V5S|1|CW|A|23
4V5S|1|CW|G|24
4V5S|1|CW|C|25
4V5S|1|CW|A|26
4V5S|1|CW|G|27
4V5S|1|CW|G|28
*
4V5S|1|CW|C|42
4V5S|1|CW|C|43
4V5S|1|CW|G|44
4V5S|1|CW|U|45
4V5S|1|CW|G|46
4V5S|1|CW|U|47
4V5S|1|CW|C|48
4V5S|1|CW|C|49
4V5S|1|CW|U|50
4V5S|1|CW|U|51
4V5S|1|CW|G|52
4V5S|1|CW|G|53
4V5S|1|CW|U|54
4V5S|1|CW|U|55
4V5S|1|CW|C|56
4V5S|1|CW|G|57
4V5S|1|CW|A|58
4V5S|1|CW|U|59
4V5S|1|CW|U|60
4V5S|1|CW|C|61
4V5S|1|CW|C|62
4V5S|1|CW|G|63
4V5S|1|CW|A|64
4V5S|1|CW|G|65
4V5S|1|CW|U|66
Current chains
- Chain CW
- E-SITE TRNA PHE OR P-SITE TRNA PHE
Nearby chains
- Chain CG
- 30S RIBOSOMAL PROTEIN S7
- Chain CK
- 30S RIBOSOMAL PROTEIN S11
- Chain D6
- 50S RIBOSOMAL PROTEIN L33
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DC
- 50S RIBOSOMAL PROTEIN L1
Coloring options: