IL_4V5S_376

3D structure

PDB id

4V5S (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUAGGGAACC*GGGUGCCCCGCGAGGGGAGCCCUAG

Length

35 nucleotides

Bulged bases

4V5S|1|CA|A|1005, 4V5S|1|CA|U|1025, 4V5S|1|CA|G|1026

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5S|1|CA|C|999
4V5S|1|CA|U|1000
4V5S|1|CA|A|1001
4V5S|1|CA|G|1001|||A
4V5S|1|CA|G|1002
4V5S|1|CA|G|1003
4V5S|1|CA|A|1004
4V5S|1|CA|A|1005
4V5S|1|CA|C|1006
4V5S|1|CA|C|1007
*
4V5S|1|CA|G|1022
4V5S|1|CA|G|1023
4V5S|1|CA|G|1024
4V5S|1|CA|U|1025
4V5S|1|CA|G|1026
4V5S|1|CA|C|1027
4V5S|1|CA|C|1028
4V5S|1|CA|C|1029
4V5S|1|CA|C|1030
4V5S|1|CA|G|1030|||A
4V5S|1|CA|C|1030|||B
4V5S|1|CA|G|1030|||C
4V5S|1|CA|A|1030|||D
4V5S|1|CA|G|1031
4V5S|1|CA|G|1032
4V5S|1|CA|G|1033
4V5S|1|CA|G|1034
4V5S|1|CA|A|1035
4V5S|1|CA|G|1036
4V5S|1|CA|C|1037
4V5S|1|CA|C|1038
4V5S|1|CA|C|1039
4V5S|1|CA|U|1040
4V5S|1|CA|A|1041
4V5S|1|CA|G|1042

Current chains

Chain CA

16S RRNA

Nearby chains