IL_4V5Y_070

3D structure

PDB id

4V5Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF).

Experimental method

X-RAY DIFFRACTION

Resolution

4.45 Å

Loop

Sequence

GGUCCCA*UGAAAC

Length

13 nucleotides

Bulged bases

4V5Y|1|BA|U|25

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V5Y|1|BA|G|23
4V5Y|1|BA|G|24
4V5Y|1|BA|U|25
4V5Y|1|BA|C|26
4V5Y|1|BA|C|27
4V5Y|1|BA|C|28
4V5Y|1|BA|A|29
*
4V5Y|1|BA|U|55
4V5Y|1|BA|G|56
4V5Y|1|BA|A|57
4V5Y|1|BA|A|58
4V5Y|1|BA|A|59
4V5Y|1|BA|C|60

Current chains

Chain BA

5S rRNA

Nearby chains

Chain BF

50S ribosomal protein L5

Chain BO

50S ribosomal protein L18