IL_4V63_021

3D structure

PDB id

4V63 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for translation termination on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.21 Å

Loop

Sequence

GUGCCAGC*GCGGUAAUAC

Length

18 nucleotides

Bulged bases

4V63|1|AA|A|532, 4V63|1|AA|U|534

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V63|1|AA|G|515
4V63|1|AA|U|516
4V63|1|AA|G|517
4V63|1|AA|C|518
4V63|1|AA|C|519
4V63|1|AA|A|520
4V63|1|AA|G|521
4V63|1|AA|C|522
*
4V63|1|AA|G|527
4V63|1|AA|C|528
4V63|1|AA|G|529
4V63|1|AA|G|530
4V63|1|AA|U|531
4V63|1|AA|A|532
4V63|1|AA|A|533
4V63|1|AA|U|534
4V63|1|AA|A|535
4V63|1|AA|C|536

Current chains

Chain AA

16S RRNA

Nearby chains

Chain AC

30S ribosomal protein S3

Chain AD

30S ribosomal protein S4

Chain AL

30S ribosomal protein S12

Chain AV

mRNA

Chain AX

Peptide chain release factor 1