IL_4V63_085

3D structure

PDB id

4V63 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structural basis for translation termination on the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.21 Å

Loop

Sequence

GU*GGC

Length

5 nucleotides

Bulged bases

4V63|1|BA|G|729

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V63_085 not in the Motif Atlas

Homologous match to IL_4WF9_023

Geometric discrepancy: 0.1058

The information below is about IL_4WF9_023

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

4V63|1|BA|G|702
4V63|1|BA|U|703
*
4V63|1|BA|G|728
4V63|1|BA|G|729
4V63|1|BA|C|730

Current chains

Chain BA

23S RRNA

Nearby chains

Chain BD

50S ribosomal protein L2