IL_4V67_028

3D structure

PDB id

4V67 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of a translation termination complex formed with release factor RF2.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GG*CCC

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V67_028 not in the Motif Atlas

Homologous match to IL_4LFB_028

Geometric discrepancy: 0.1635

The information below is about IL_4LFB_028

Detailed Annotation

Major groove platform

Broad Annotation

No text annotation

Motif group

IL_48076.8

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

43

Unit IDs

4V67|1|AA|G|657
4V67|1|AA|G|658
*
4V67|1|AA|C|747
4V67|1|AA|C|748
4V67|1|AA|C|749

Current chains

Chain AA

16S RRNA

Nearby chains

Chain AO

30S ribosomal protein S15