3D structure

PDB id
4V67 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of a translation termination complex formed with release factor RF2.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CCG*CUG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V67_082 not in the Motif Atlas
Homologous match to IL_7RQB_017
Geometric discrepancy: 0.067
The information below is about IL_7RQB_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_86319.2
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
270

Unit IDs

4V67|1|BA|C|672
4V67|1|BA|C|673
4V67|1|BA|G|674
*
4V67|1|BA|C|806
4V67|1|BA|U|807
4V67|1|BA|G|808

Current chains

Chain BA
23S RRNA

Nearby chains

Chain BF
50S ribosomal protein L4
Chain BP
50S ribosomal protein L15

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.0825 s