3D structure

PDB id
4V67 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of a translation termination complex formed with release factor RF2.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UGCAUG*CAUG
Length
10 nucleotides
Bulged bases
4V67|1|AA|C|1054
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V67_359 not in the Motif Atlas
Homologous match to IL_6CZR_365
Geometric discrepancy: 0.1867
The information below is about IL_6CZR_365
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_45699.1
Basepair signature
cWW-L-R-L-R-L-cWW
Number of instances in this motif group
2

Unit IDs

4V67|1|AA|U|1052
4V67|1|AA|G|1053
4V67|1|AA|C|1054
4V67|1|AA|A|1055
4V67|1|AA|U|1056
4V67|1|AA|G|1057
*
4V67|1|AA|C|1203
4V67|1|AA|A|1204
4V67|1|AA|U|1205
4V67|1|AA|G|1206

Current chains

Chain AA
16S RRNA

Nearby chains

Chain AC
30S ribosomal protein S3
Chain AJ
30S ribosomal protein S10
Chain AN
30S ribosomal protein S14
Chain AV
MRNA
Chain AX
Bacterial peptide chain release factor 2 (RF-2)

Coloring options:


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