3D structure

PDB id
4V67 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of a translation termination complex formed with release factor RF2.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
GGAAG*UGACAAC
Length
12 nucleotides
Bulged bases
4V67|1|BA|C|1544
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V67_364 not in the Motif Atlas
Homologous match to IL_9DFE_062
Geometric discrepancy: 0.3955
The information below is about IL_9DFE_062
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_25943.1
Basepair signature
cWW-tWH-tHH-tHS-cWW
Number of instances in this motif group
5

Unit IDs

4V67|1|BA|G|1526
4V67|1|BA|G|1527
4V67|1|BA|A|1528
4V67|1|BA|A|1529
4V67|1|BA|G|1530
*
4V67|1|BA|U|1541
4V67|1|BA|G|1542
4V67|1|BA|A|1543
4V67|1|BA|C|1544
4V67|1|BA|A|1545
4V67|1|BA|A|1546
4V67|1|BA|C|154|||B

Current chains

Chain BA
23S RRNA

Nearby chains

No other chains within 10Å

Coloring options:


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