IL_4V6A_242

3D structure

PDB id

4V6A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of EF-P bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6A_242 not in the Motif Atlas

Homologous match to IL_7A0S_022

Geometric discrepancy: 0.1015

The information below is about IL_7A0S_022

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

4V6A|1|DA|C|837
4V6A|1|DA|C|838
*
4V6A|1|DA|G|940
4V6A|1|DA|A|941
4V6A|1|DA|G|942

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D3

50S ribosomal protein L30

Chain D8

50S ribosomal protein L35

Chain DP

50S ribosomal protein L15