IL_4V6A_295

3D structure

PDB id

4V6A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of EF-P bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGGUCGCGC*GCGCGGCUG

Length

18 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6A|1|DA|U|2099
4V6A|1|DA|G|2100
4V6A|1|DA|G|2101
4V6A|1|DA|U|2102
4V6A|1|DA|C|2103
4V6A|1|DA|G|2104
4V6A|1|DA|C|2105
4V6A|1|DA|G|2106
4V6A|1|DA|C|2107
*
4V6A|1|DA|G|2182
4V6A|1|DA|C|2183
4V6A|1|DA|G|2184
4V6A|1|DA|C|2185
4V6A|1|DA|G|2186
4V6A|1|DA|G|2187
4V6A|1|DA|C|2188
4V6A|1|DA|U|2189
4V6A|1|DA|G|2190

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CK

30S ribosomal protein S11

Chain DC

50S ribosomal protein L1