IL_4V6A_335

3D structure

PDB id

4V6A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of EF-P bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCGAUG*CUAAUCGC

Length

14 nucleotides

Bulged bases

4V6A|1|AA|A|1256, 4V6A|1|AA|U|1257, 4V6A|1|AA|U|1278, 4V6A|1|AA|A|1280, 4V6A|1|AA|U|1281

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6A|1|AA|G|1253
4V6A|1|AA|C|1254
4V6A|1|AA|G|1255
4V6A|1|AA|A|1256
4V6A|1|AA|U|1257
4V6A|1|AA|G|1258
*
4V6A|1|AA|C|1277
4V6A|1|AA|U|1278
4V6A|1|AA|A|1279
4V6A|1|AA|A|1280
4V6A|1|AA|U|1281
4V6A|1|AA|C|1282
4V6A|1|AA|G|1283
4V6A|1|AA|C|1284

Current chains

Chain AA

16S ribosomal RNA

Nearby chains

Chain AC

30S ribosomal protein S3

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14

Chain AU

30S ribosomal protein Thx