IL_4V6A_362

3D structure

PDB id

4V6A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of EF-P bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CUAGGGAACCCG*UGGGGUGCCCCGCGAGGGGAGCCCUAG

Length

39 nucleotides

Bulged bases

4V6A|1|AA|G|1001|||A, 4V6A|1|AA|G|1002, 4V6A|1|AA|C|1029, 4V6A|1|AA|G|1030|||A

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6A|1|AA|C|999
4V6A|1|AA|U|1000
4V6A|1|AA|A|1001
4V6A|1|AA|G|1001|||A
4V6A|1|AA|G|1002
4V6A|1|AA|G|1003
4V6A|1|AA|A|1004
4V6A|1|AA|A|1005
4V6A|1|AA|C|1006
4V6A|1|AA|C|1007
4V6A|1|AA|C|1008
4V6A|1|AA|G|1009
*
4V6A|1|AA|U|1020
4V6A|1|AA|G|1021
4V6A|1|AA|G|1022
4V6A|1|AA|G|1023
4V6A|1|AA|G|1024
4V6A|1|AA|U|1025
4V6A|1|AA|G|1026
4V6A|1|AA|C|1027
4V6A|1|AA|C|1028
4V6A|1|AA|C|1029
4V6A|1|AA|C|1030
4V6A|1|AA|G|1030|||A
4V6A|1|AA|C|1030|||B
4V6A|1|AA|G|1030|||C
4V6A|1|AA|A|1030|||D
4V6A|1|AA|G|1031
4V6A|1|AA|G|1032
4V6A|1|AA|G|1033
4V6A|1|AA|G|1034
4V6A|1|AA|A|1035
4V6A|1|AA|G|1036
4V6A|1|AA|C|1037
4V6A|1|AA|C|1038
4V6A|1|AA|C|1039
4V6A|1|AA|U|1040
4V6A|1|AA|A|1041
4V6A|1|AA|G|1042

Current chains

Chain AA

16S ribosomal RNA

Nearby chains