IL_4V6D_018

3D structure

PDB id

4V6D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.81 Å

Loop

Sequence

CACAAU*AUG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6D|1|AA|C|370
4V6D|1|AA|A|371
4V6D|1|AA|C|372
4V6D|1|AA|A|373
4V6D|1|AA|A|374
4V6D|1|AA|U|375
*
4V6D|1|AA|A|389
4V6D|1|AA|U|390
4V6D|1|AA|G|391

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AP

30S ribosomal protein S16