IL_4V6D_238

3D structure

PDB id

4V6D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.81 Å

Loop

Sequence

CGGAUUG*CAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6D|1|CA|C|1303
4V6D|1|CA|G|1304
4V6D|1|CA|G|1305
4V6D|1|CA|A|1306
4V6D|1|CA|U|1307
4V6D|1|CA|U|1308
4V6D|1|CA|G|1309
*
4V6D|1|CA|C|1328
4V6D|1|CA|A|1329
4V6D|1|CA|U|1330
4V6D|1|CA|G|1331
4V6D|1|CA|A|1332
4V6D|1|CA|A|1333
4V6D|1|CA|G|1334

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CM

30S ribosomal protein S13

Chain CS

30S ribosomal protein S19