IL_4V6D_360

3D structure

PDB id

4V6D (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.81 Å

Loop

Sequence

GGGACG*CCAGGAAAAGC

Length

17 nucleotides

Bulged bases

4V6D|1|BA|A|1566

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6D|1|BA|G|1424
4V6D|1|BA|G|1425
4V6D|1|BA|G|1426
4V6D|1|BA|A|1427
4V6D|1|BA|C|1428
4V6D|1|BA|G|1429
*
4V6D|1|BA|C|1564
4V6D|1|BA|C|1565
4V6D|1|BA|A|1566
4V6D|1|BA|G|1567
4V6D|1|BA|G|1568
4V6D|1|BA|A|1569
4V6D|1|BA|A|1570
4V6D|1|BA|A|1571
4V6D|1|BA|A|1572
4V6D|1|BA|G|1573
4V6D|1|BA|C|1574

Current chains

Chain BA

23S rRNA

Nearby chains

Chain BC

50S ribosomal protein L2