3D structure

PDB id
4V6E (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting
Experimental method
X-RAY DIFFRACTION
Resolution
3.71 Å

Loop

Sequence
GUUAAGUG*CUAAAC
Length
14 nucleotides
Bulged bases
4V6E|1|BA|A|1143
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V6E|1|BA|G|1017
4V6E|1|BA|U|1018
4V6E|1|BA|U|1019
4V6E|1|BA|A|1020
4V6E|1|BA|A|1021
4V6E|1|BA|G|1022
4V6E|1|BA|U|1023
4V6E|1|BA|G|1024
*
4V6E|1|BA|C|1140
4V6E|1|BA|U|1141
4V6E|1|BA|A|1142
4V6E|1|BA|A|1143
4V6E|1|BA|A|1144
4V6E|1|BA|C|1145

Current chains

Chain BA
23S rRNA

Nearby chains

Chain B4
50S ribosomal protein L36
Chain BJ
50S ribosomal protein L13

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1644 s