IL_4V6E_221
3D structure
- PDB id
- 4V6E (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.71 Å
Loop
- Sequence
- GGU*ACAC
- Length
- 7 nucleotides
- Bulged bases
- 4V6E|1|CA|A|1227
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6E_221 not in the Motif Atlas
- Geometric match to IL_5ML7_010
- Geometric discrepancy: 0.3489
- The information below is about IL_5ML7_010
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_07785.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 33
Unit IDs
4V6E|1|CA|G|953
4V6E|1|CA|G|954
4V6E|1|CA|U|955
*
4V6E|1|CA|A|1225
4V6E|1|CA|C|1226
4V6E|1|CA|A|1227
4V6E|1|CA|C|1228
Current chains
- Chain CA
- 16S rRNA
Nearby chains
- Chain CM
- 30S ribosomal protein S13
- Chain CS
- 30S ribosomal protein S19
- Chain CV
- P-site tRNA ASL fragment
- Chain CX
- P-site tRNA ASL fragment
Coloring options: