IL_4V6E_370

3D structure

PDB id

4V6E (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting

Experimental method

X-RAY DIFFRACTION

Resolution

3.71 Å

Loop

Sequence

UAGU*AG

Length

6 nucleotides

Bulged bases

4V6E|1|CA|A|250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6E_370 not in the Motif Atlas

Homologous match to IL_6CZR_405

Geometric discrepancy: 0.4499

The information below is about IL_6CZR_405

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47074.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

4

Unit IDs

4V6E|1|CA|U|249
4V6E|1|CA|A|250
4V6E|1|CA|G|251
4V6E|1|CA|U|252
*
4V6E|1|CA|A|274
4V6E|1|CA|G|275

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CQ

30S ribosomal protein S17