IL_4V6F_025

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CC*GAG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6F_025 not in the Motif Atlas

Homologous match to IL_7A0S_022

Geometric discrepancy: 0.0994

The information below is about IL_7A0S_022

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

4V6F|1|AA|C|837
4V6F|1|AA|C|838
*
4V6F|1|AA|G|940
4V6F|1|AA|A|941
4V6F|1|AA|G|942

Current chains

Chain AA

23S RIBOSOMAL RNA

Nearby chains

Chain AO

50S RIBOSOMAL PROTEIN L15