IL_4V6F_179
3D structure
- PDB id
- 4V6F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Elongation complex of the 70S ribosome with three tRNAs and mRNA.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUU*AUCA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V6F_179 not in the Motif Atlas
- Geometric match to IL_5C5W_003
- Geometric discrepancy: 0.1869
- The information below is about IL_5C5W_003
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_54697.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 52
Unit IDs
4V6F|1|C1|U|38
4V6F|1|C1|U|39
4V6F|1|C1|U|40
4V6F|1|C1|U|41
*
4V6F|1|CA|A|1531
4V6F|1|CA|U|1532
4V6F|1|CA|C|1533
4V6F|1|CA|A|1534
Current chains
- Chain C1
- MRNA
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CJ
- 30S ribosomal protein S7
- Chain CN
- 30S ribosomal protein S11
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