IL_4V6F_226

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CAGC*GG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6F_226 not in the Motif Atlas

Geometric match to IL_5WLH_001

Geometric discrepancy: 0.2647

The information below is about IL_5WLH_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_82107.5

Basepair signature

cWW-cWW

Number of instances in this motif group

31

Unit IDs

4V6F|1|CA|C|1129
4V6F|1|CA|A|1130
4V6F|1|CA|G|1131
4V6F|1|CA|C|1132
*
4V6F|1|CA|G|1142
4V6F|1|CA|G|1143

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CL

30S ribosomal protein S9