IL_4V6F_284

3D structure

PDB id

4V6F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Elongation complex of the 70S ribosome with three tRNAs and mRNA.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GAGUG*CUC

Length

8 nucleotides

Bulged bases

4V6F|1|DA|A|1088

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V6F_284 not in the Motif Atlas

Homologous match to IL_7RQB_044

Geometric discrepancy: 0.3579

The information below is about IL_7RQB_044

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V6F|1|DA|G|1087
4V6F|1|DA|A|1088
4V6F|1|DA|G|1089
4V6F|1|DA|U|1090
4V6F|1|DA|G|1091
*
4V6F|1|DA|C|1100
4V6F|1|DA|U|1101
4V6F|1|DA|C|1102

Current chains

Chain DA

23S RRNA

Nearby chains

Chain DL

50S ribosomal protein L11

Chain DY

50S ribosomal protein L10