IL_4V7K_162
3D structure
- PDB id
- 4V7K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.6 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7K_162 not in the Motif Atlas
- Geometric match to IL_4P43_001
- Geometric discrepancy: 0.1173
- The information below is about IL_4P43_001
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_44258.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 301
Unit IDs
4V7K|1|Aa|G|1061
4V7K|1|Aa|U|1062
4V7K|1|Aa|C|1063
*
4V7K|1|Aa|G|1193
4V7K|1|Aa|U|1194
4V7K|1|Aa|C|1195
Current chains
- Chain Aa
- RNA (1504-MER)
Nearby chains
- Chain Ac
- 30S ribosomal protein S3
- Chain Ae
- 30S ribosomal protein S5
- Chain Ai
- 30S ribosomal protein S9
- Chain Aj
- 30S ribosomal protein S10
- Chain An
- 30S ribosomal protein S14 type Z
- Chain Ay
- Toxin relE
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