IL_4V7K_265

3D structure

PDB id

4V7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

GGAGCC*GGCGCCGGUGAAAUAC

Length

22 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7K|1|BA|G|2124
4V7K|1|BA|G|2125
4V7K|1|BA|A|2126
4V7K|1|BA|G|2127
4V7K|1|BA|C|2128
4V7K|1|BA|C|2129
*
4V7K|1|BA|G|2159
4V7K|1|BA|G|2160
4V7K|1|BA|C|2161
4V7K|1|BA|G|2162
4V7K|1|BA|C|2163
4V7K|1|BA|C|2164
4V7K|1|BA|G|2165
4V7K|1|BA|G|2166
4V7K|1|BA|U|2167
4V7K|1|BA|G|2168
4V7K|1|BA|A|2169
4V7K|1|BA|A|2170
4V7K|1|BA|A|2171
4V7K|1|BA|U|2172
4V7K|1|BA|A|2173
4V7K|1|BA|C|2174

Current chains

Chain BA

RNA (2848-MER)

Nearby chains

Chain BC

50S ribosomal protein L1

Chain Bw

Transfer RNA; tRNA