3D structure

PDB id
4V7K (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)
Experimental method
X-RAY DIFFRACTION
Resolution
3.6 Å

Loop

Sequence
AGGGAACCC*GGGGUGCCCCGCGAGGGGAGCCCU
Length
33 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7K|1|Ba|A|1001
4V7K|1|Ba|G|1001|||A
4V7K|1|Ba|G|1002
4V7K|1|Ba|G|1003
4V7K|1|Ba|A|1004
4V7K|1|Ba|A|1005
4V7K|1|Ba|C|1006
4V7K|1|Ba|C|1007
4V7K|1|Ba|C|1008
*
4V7K|1|Ba|G|1021
4V7K|1|Ba|G|1022
4V7K|1|Ba|G|1023
4V7K|1|Ba|G|1024
4V7K|1|Ba|U|1025
4V7K|1|Ba|G|1026
4V7K|1|Ba|C|1027
4V7K|1|Ba|C|1028
4V7K|1|Ba|C|1029
4V7K|1|Ba|C|1030
4V7K|1|Ba|G|1030|||A
4V7K|1|Ba|C|1030|||B
4V7K|1|Ba|G|1030|||C
4V7K|1|Ba|A|1030|||D
4V7K|1|Ba|G|1031
4V7K|1|Ba|G|1032
4V7K|1|Ba|G|1033
4V7K|1|Ba|G|1034
4V7K|1|Ba|A|1035
4V7K|1|Ba|G|1036
4V7K|1|Ba|C|1037
4V7K|1|Ba|C|1038
4V7K|1|Ba|C|1039
4V7K|1|Ba|U|1040

Current chains

Chain Ba
RNA (1504-MER)

Nearby chains

No other chains within 10Å

Coloring options:

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