IL_4V7K_377

3D structure

PDB id

4V7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CGGCCAACU*AGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7K|1|Aa|C|504
4V7K|1|Aa|G|505
4V7K|1|Aa|G|506
4V7K|1|Aa|C|507
4V7K|1|Aa|C|508
4V7K|1|Aa|A|509
4V7K|1|Aa|A|510
4V7K|1|Aa|C|511
4V7K|1|Aa|U|512
*
4V7K|1|Aa|A|539
4V7K|1|Aa|G|540
4V7K|1|Aa|G|541

Current chains

Chain Aa

RNA (1504-MER)

Nearby chains

Chain Ad

30S ribosomal protein S4

Chain Al

30S ribosomal protein S12