IL_4V7K_392

3D structure

PDB id

4V7K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)

Experimental method

X-RAY DIFFRACTION

Resolution

3.6 Å

Loop

Sequence

CUGUGAACCCCCG*UGGGGGGGAG

Length

23 nucleotides

Bulged bases

4V7K|1|BA|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7K|1|BA|C|2129
4V7K|1|BA|U|2130
4V7K|1|BA|G|2131
4V7K|1|BA|U|2132
4V7K|1|BA|G|2133
4V7K|1|BA|A|2134
4V7K|1|BA|A|2135
4V7K|1|BA|C|2136
4V7K|1|BA|C|2137
4V7K|1|BA|C|2138
4V7K|1|BA|C|2139
4V7K|1|BA|C|2140
4V7K|1|BA|G|2141
*
4V7K|1|BA|U|2150
4V7K|1|BA|G|2151
4V7K|1|BA|G|2152
4V7K|1|BA|G|2153
4V7K|1|BA|G|2154
4V7K|1|BA|G|2155
4V7K|1|BA|G|2156
4V7K|1|BA|G|2157
4V7K|1|BA|A|2158
4V7K|1|BA|G|2159

Current chains

Chain BA

RNA (2848-MER)

Nearby chains

Chain Aa

Small subunit ribosomal RNA; SSU rRNA

Chain BC

50S ribosomal protein L1