IL_4V7L_084

3D structure

PDB id

4V7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of viomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUC*GGC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7L_084 not in the Motif Atlas

Homologous match to IL_4WF9_010

Geometric discrepancy: 0.3907

The information below is about IL_4WF9_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7L|1|BA|G|271|||D
4V7L|1|BA|U|271|||E
4V7L|1|BA|C|271|||F
*
4V7L|1|BA|G|271|||R
4V7L|1|BA|G|271|||S
4V7L|1|BA|C|271|||T

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain B1

50S ribosomal protein L28

Chain BI

50S ribosomal protein L9