IL_4V7L_199
3D structure
- PDB id
- 4V7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of viomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AAC*GUU
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary: AAC,GUU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7L_199 not in the Motif Atlas
- Geometric match to IL_3GM7_006
- Geometric discrepancy: 0.2119
- The information below is about IL_3GM7_006
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4V7L|1|CA|A|32
4V7L|1|CA|A|33
4V7L|1|CA|C|34
*
4V7L|1|CA|G|550
4V7L|1|CA|U|551
4V7L|1|CA|U|552
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CL
- 30S ribosomal protein S12
Coloring options: