IL_4V7L_313
3D structure
- PDB id
- 4V7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of viomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CCCCCAAGUC*GCG
- Length
- 13 nucleotides
- Bulged bases
- 4V7L|1|DA|U|1012
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7L_313 not in the Motif Atlas
- Geometric match to IL_4WF9_083
- Geometric discrepancy: 0.2378
- The information below is about IL_4WF9_083
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_87907.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 179
Unit IDs
4V7L|1|DA|C|1004
4V7L|1|DA|C|1005
4V7L|1|DA|C|1006
4V7L|1|DA|C|1007
4V7L|1|DA|C|1008
4V7L|1|DA|A|1009
4V7L|1|DA|A|1010
4V7L|1|DA|G|1011
4V7L|1|DA|U|1012
4V7L|1|DA|C|1013
*
4V7L|1|DA|G|1149
4V7L|1|DA|C|1150
4V7L|1|DA|G|1151
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain DN
- 50S ribosomal protein L13
- Chain DU
- 50S ribosomal protein L20
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