IL_4V7L_384
3D structure
- PDB id
- 4V7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of viomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- UCG*CGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Self-complementary:
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7L_384 not in the Motif Atlas
- Geometric match to IL_406D_002
- Geometric discrepancy: 0.2498
- The information below is about IL_406D_002
- Detailed Annotation
- Isolated cWH basepair
- Broad Annotation
- No text annotation
- Motif group
- IL_10167.6
- Basepair signature
- cWW-cHW-cWW
- Number of instances in this motif group
- 51
Unit IDs
4V7L|1|DA|U|2514
4V7L|1|DA|C|2515
4V7L|1|DA|G|2516
*
4V7L|1|DA|C|2568
4V7L|1|DA|G|2569
4V7L|1|DA|G|2570
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain DE
- 50S ribosomal protein L3
- Chain DN
- 50S ribosomal protein L13
Coloring options: